STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0782Inner membrane protein YrbG; Alternative locus ID: PMIT9107_0885; predicted calcium/sodium:proton antiporter. (359 aa)    
Predicted Functional Partners:
EU92_0881
Putative Na+/H+ antiporter; Alternative locus ID: PMIT9107_0984; CPA1 family.
 
 
 
 0.614
EU92_0781
Dihydroorotase; Alternative locus ID: PMIT9107_0884.
       0.559
EU92_1887
Sulfate permease; Alternative locus ID: PMIT9107_0240; Trk-type.
 
  
 0.423
EU92_0779
Hypothetical protein; Alternative locus ID: PMIT9107_0882; FIG00940803: hypothetical protein.
       0.400
EU92_0780
NADH dehydrogenase subunit; Alternative locus ID: PMIT9107_0883; NdhL.
       0.400
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.