Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU92_1024Dipeptide transport system permease protein DppB; Alternative locus ID: PMIT9107_1323; TCDB 3.A.1.5.2. (340 aa)    
Predicted Functional Partners:
EU92_1023
ABC transporter; Alternative locus ID: PMIT9107_1322; substrate binding protein, possibly oligopeptides.
 
 0.999
EU92_1115
Dipeptide transport system permease protein DppC; Alternative locus ID: PMIT9107_1692; TCDB 3.A.1.5.2.
 0.999
EU92_1772
Oligopeptide transport ATP-binding protein OppD; Alternative locus ID: PMIT9107_0125; TCDB 3.A.1.5.1.
 
 0.998
EU92_1022
Hypothetical protein; Alternative locus ID: PMIT9107_1321; FIG00940188: hypothetical protein.
       0.780
EU92_0862
Ferric iron ABC transporter; Alternative locus ID: PMIT9107_0965; permease protein.
   
 
  0.633
EU92_1452
ATPase; Alternative locus ID: PMIT9107_0569.
     
  0.627
EU92_1497
Cytochrome c-type bioproteinsis protein CcsA/ResC; Alternative locus ID: PMIT9107_0614.
     
  0.627
EU92_1498
Lipopolysaccharide ABC transporter; Alternative locus ID: PMIT9107_0615; ATP-binding protein LptB.
     
  0.627
EU92_1021
Homoserine dehydrogenase; Alternative locus ID: PMIT9107_1320.
       0.623
EU92_1430
ATP-binding protein of ABC transporter; Alternative locus ID: PMIT9107_0547.
  
  
  0.591
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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