STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_1087Cytochrome c oxidase polypeptide II; Alternative locus ID: PMIT9107_1664. (267 aa)    
Predicted Functional Partners:
EU92_1088
Cytochrome c oxidase polypeptide I; Alternative locus ID: PMIT9107_1665.
 
 0.999
EU92_1089
Cytochrome c oxidase polypeptide III; Alternative locus ID: PMIT9107_1666.
 
 0.999
EU92_1629
Cytochrome c oxidase polypeptide I; Alternative locus ID: PMIT9107_0746.
 
 0.997
EU92_1630
Cytochrome c oxidase polypeptide III; Alternative locus ID: PMIT9107_0747.
 
 0.997
EU92_1085
Heme O synthase; Alternative locus ID: PMIT9107_1662; protoheme IX farnesyltransferase COX10-CtaB.
 
 
 0.996
EU92_1212
Cytochrome b6-f complex subunit; Alternative locus ID: PMIT9107_1789; cytochrome b6.
  
 0.996
EU92_0890
Cytochrome b6-f complex iron-sulfur subunit PetC1; Alternative locus ID: PMIT9107_0993.
  
 0.987
EU92_1516
Mitochondrial processing peptidase-like protein; Alternative locus ID: PMIT9107_0633.
    
 0.959
EU92_1517
Insulinase family (Peptidase family M16); Alternative locus ID: PMIT9107_0634.
    
 0.959
EU92_1804
NAD(P)H-quinone oxidoreductase chain 1; Alternative locus ID: PMIT9107_0157.
   
 
 0.959
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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