STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_1246Membrane alanine aminopeptidase N; Alternative locus ID: PMIT9107_0363. (869 aa)    
Predicted Functional Partners:
EU92_0374
Cytosol aminopeptidase PepA; Alternative locus ID: PMIT9107_1092.
  
 0.944
EU92_1701
Serine hydroxymethyltransferase; Alternative locus ID: PMIT9107_0054.
    
 0.929
EU92_1786
Glutathione synthetase; Alternative locus ID: PMIT9107_0139.
  
  
 0.922
EU92_1130
Cysteine synthase; Alternative locus ID: PMIT9107_1707.
 
   
 0.916
EU92_1844
Cysteine synthase; Alternative locus ID: PMIT9107_0197.
 
   
 0.915
EU92_1589
Aspartate aminotransferase; Alternative locus ID: PMIT9107_0706.
   
 
 0.907
EU92_0971
Cold-shock DEAD-box protein A; Alternative locus ID: PMIT9107_1270.
   
 0.657
EU92_1299
Hypothetical protein; Alternative locus ID: PMIT9107_0416; FIG00940478: hypothetical protein.
    
 0.627
EU92_0013
Isocitrate dehydrogenase (NADP); Alternative locus ID: PMIT9107_1391.
    
 0.562
EU92_1128
Cystathionine beta-lyase; Alternative locus ID: PMIT9107_1705.
     
 0.518
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.