Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU92_1990Signal recognition particle receptor protein FtsY (alpha subunit); Alternative locus ID: PMIT9107_0343; TCDB 3.A.5.1.1. (419 aa)    
Predicted Functional Partners:
EU92_0422
Signal recognition particle; Alternative locus ID: PMIT9107_1140; subunit Ffh SRP54; TCDB 3.A.5.1.1.
 
0.992
EU92_0651
Preprotein translocase subunit SecG; Alternative locus ID: PMIT9107_1963; TCDB 3.A.5.1.1.
   
 0.960
EU92_1758
Preprotein translocase subunit SecE; Alternative locus ID: PMIT9107_0111; TCDB 3.A.5.1.1.
    
 0.960
EU92_0538
Preprotein translocase secY subunit; Alternative locus ID: PMIT9107_1854; TCDB 3.A.5.1.1.
   
 0.939
EU92_0057
Protein export cytoplasm protein SecA ATPase RNA helicase; Alternative locus ID: PMIT9107_1435; TCDB 3.A.5.1.1.
     
 0.920
EU92_0235
Inner membrane protein translocase component YidC; Alternative locus ID: PMIT9107_1610; short form OxaI-like.
   
 
 0.919
EU92_0553
LSU ribosomal protein L2p (L8e); Alternative locus ID: PMIT9107_1869.
    
 
 0.831
EU92_0546
LSU ribosomal protein L14p (L23e); Alternative locus ID: PMIT9107_1862.
  
 
 
 0.827
EU92_0548
LSU ribosomal protein L29p (L35e); Alternative locus ID: PMIT9107_1864.
    
 
 0.804
EU92_0544
LSU ribosomal protein L5p (L11e); Alternative locus ID: PMIT9107_1860.
    
 
 0.803
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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