STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_1995DNA gyrase subunit A; Alternative locus ID: PMIT9107_0348. (813 aa)    
Predicted Functional Partners:
EU92_0052
DNA gyrase subunit B; Alternative locus ID: PMIT9107_1430.
 0.999
EU92_1993
Epoxyqueuosine (oQ) reductase QueG; Alternative locus ID: PMIT9107_0346.
       0.675
EU92_1009
DNA gyrase subunit A; Alternative locus ID: PMIT9107_1308.
  
  
 
0.673
EU92_1994
Hypothetical protein; Alternative locus ID: PMIT9107_0347; FIG00940173: hypothetical protein.
  
    0.663
EU92_0837
Signal peptidase I; Alternative locus ID: PMIT9107_0940.
  
  
 0.653
EU92_1344
Phenylalanyl-tRNA synthetase beta chain; Alternative locus ID: PMIT9107_0461.
  
  
 0.617
EU92_1991
Transcription termination protein NusB; Alternative locus ID: PMIT9107_0344.
  
  
 0.574
EU92_0175
DNA polymerasee I; Alternative locus ID: PMIT9107_1550.
  
  
 0.544
EU92_1992
Transporter; Alternative locus ID: PMIT9107_0345.
       0.534
EU92_1990
Signal recognition particle receptor protein FtsY (alpha subunit); Alternative locus ID: PMIT9107_0343; TCDB 3.A.5.1.1.
     
 0.524
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.