STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_1998RNA metabolism-related protein; Alternative locus ID: PMIT9107_0351. (235 aa)    
Predicted Functional Partners:
EU92_1997
Phosphoribosylformylglycinamidine synthase; Alternative locus ID: PMIT9107_0350; synthetase subunit.
       0.824
EU92_1999
DNA polymerasee III beta subunit; Alternative locus ID: PMIT9107_0352.
       0.824
EU92_1996
Amidophosphoribosyltransferase; Alternative locus ID: PMIT9107_0349.
       0.697
EU92_2000
Threonine synthase; Alternative locus ID: PMIT9107_0353.
       0.513
EU92_2001
Hypothetical protein; Alternative locus ID: PMIT9107_0354; FIG00940819: hypothetical protein.
       0.513
EU92_2002
Ubiquinone biosynthesis monooxygenase UbiB; Alternative locus ID: PMIT9107_0355.
       0.512
EU92_2003
DNA repair protein RecN; Alternative locus ID: PMIT9107_0356.
       0.409
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.