Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU92_2003DNA repair protein RecN; Alternative locus ID: PMIT9107_0356. (559 aa)    
Predicted Functional Partners:
EU92_0560
RecA protein; Alternative locus ID: PMIT9107_1876.
  
  
 0.765
EU92_0446
SOS-response repressor and protease LexA; Alternative locus ID: PMIT9107_1164.
   
  
 0.674
EU92_2000
Threonine synthase; Alternative locus ID: PMIT9107_0353.
       0.642
EU92_2001
Hypothetical protein; Alternative locus ID: PMIT9107_0354; FIG00940819: hypothetical protein.
       0.642
EU92_2002
Ubiquinone biosynthesis monooxygenase UbiB; Alternative locus ID: PMIT9107_0355.
       0.642
EU92_0033
Holliday junction DNA helicase RuvB; Alternative locus ID: PMIT9107_1411.
 
   
 0.632
EU92_0130
Excinuclease ABC subunit A; Alternative locus ID: PMIT9107_1508.
  
  
 0.626
EU92_1355
Excinuclease ABC subunit C; Alternative locus ID: PMIT9107_0472.
  
   
 0.608
EU92_1412
Error-prone repair protein UmuD; Alternative locus ID: PMIT9107_0529.
   
  
 0.599
EU92_1418
Holliday junction DNA helicase RuvA; Alternative locus ID: PMIT9107_0535.
  
  
 0.599
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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