Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABM77642.1 | ABM77643.1 | P9303_08911 | P9303_08921 | Hypothetical protein. | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.479 |
ABM77642.1 | ABM77644.1 | P9303_08911 | P9303_08931 | Hypothetical protein. | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | 0.479 |
ABM77642.1 | ABM77647.1 | P9303_08911 | P9303_08961 | Hypothetical protein. | Conserved hypothetical protein. | 0.479 |
ABM77642.1 | chlI | P9303_08911 | P9303_08951 | Hypothetical protein. | Protoporphyrin IX Magnesium chelatase, ChlI subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.479 |
ABM77642.1 | lasT | P9303_08911 | P9303_08981 | Hypothetical protein. | Probable tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.428 |
ABM77642.1 | penP | P9303_08911 | P9303_08971 | Hypothetical protein. | COG2367 Beta-lactamase class A [Defense mechanisms]. | 0.479 |
ABM77642.1 | ruvC | P9303_08911 | P9303_08941 | Hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.479 |
ABM77643.1 | ABM77642.1 | P9303_08921 | P9303_08911 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Hypothetical protein. | 0.479 |
ABM77643.1 | ABM77644.1 | P9303_08921 | P9303_08931 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | 0.773 |
ABM77643.1 | ABM77647.1 | P9303_08921 | P9303_08961 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Conserved hypothetical protein. | 0.774 |
ABM77643.1 | chlI | P9303_08921 | P9303_08951 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Protoporphyrin IX Magnesium chelatase, ChlI subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.820 |
ABM77643.1 | lasT | P9303_08921 | P9303_08981 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Probable tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.747 |
ABM77643.1 | penP | P9303_08921 | P9303_08971 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | COG2367 Beta-lactamase class A [Defense mechanisms]. | 0.782 |
ABM77643.1 | ruvC | P9303_08921 | P9303_08941 | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.820 |
ABM77644.1 | ABM77642.1 | P9303_08931 | P9303_08911 | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | Hypothetical protein. | 0.479 |
ABM77644.1 | ABM77643.1 | P9303_08931 | P9303_08921 | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | COG212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.773 |
ABM77644.1 | ABM77647.1 | P9303_08931 | P9303_08961 | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | Conserved hypothetical protein. | 0.802 |
ABM77644.1 | chlI | P9303_08931 | P9303_08951 | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | Protoporphyrin IX Magnesium chelatase, ChlI subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.773 |
ABM77644.1 | lasT | P9303_08931 | P9303_08981 | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | Probable tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.680 |
ABM77644.1 | penP | P9303_08931 | P9303_08971 | SAM (and some other nucleotide) binding motif; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]. | COG2367 Beta-lactamase class A [Defense mechanisms]. | 0.773 |
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