STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM78570.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
ABM76941.1
Conserved hypothetical protein.
  
     0.768
ABM79512.1
Conserved hypothetical protein.
  
     0.766
ABM77064.1
Conserved hypothetical protein.
  
     0.764
ABM78548.1
Conserved hypothetical protein.
  
     0.694
ABM79424.1
Conserved hypothetical protein.
  
     0.688
ABM77437.1
Possible Ligand-binding domain of nuclear hormone.
  
     0.649
ABM77406.1
COG859 ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane].
  
     0.634
ABM78909.1
Conserved hypothetical protein.
  
     0.631
ABM78142.1
Conserved hypothetical protein.
  
     0.627
pcxA
CemA family protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family.
  
     0.599
Your Current Organism:
Prochlorococcus marinus MIT9303
NCBI taxonomy Id: 59922
Other names: P. marinus str. MIT 9303, Prochlorococcus marinus str. MIT 9303, Prochlorococcus sp. MIT 9303, Prochlorococcus sp. MIT9303
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.