STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM79138.1Hypothetical protein; COG4974 Site-specific recombinase XerD [DNA replication, recombination, and repair]. (368 aa)    
Predicted Functional Partners:
ABM79137.1
Hypothetical protein.
       0.773
ABM79136.1
Hypothetical protein.
       0.642
ABM79139.1
Hypothetical protein; Belongs to the DNA glycosylase MPG family.
       0.442
ABM79140.1
Hypothetical protein; COG457 FOG: TPR repeat [General function prediction only].
       0.403
guaA
Glutamine amidotransferase class-I:GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.402
Your Current Organism:
Prochlorococcus marinus MIT9303
NCBI taxonomy Id: 59922
Other names: P. marinus str. MIT 9303, Prochlorococcus marinus str. MIT 9303, Prochlorococcus sp. MIT 9303, Prochlorococcus sp. MIT9303
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.