STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM79229.1COG2251 Predicted nuclease (RecB family) [General function prediction only]. (535 aa)    
Predicted Functional Partners:
ABM77455.1
Conserved hypothetical protein.
  
     0.758
ABM77266.1
Conserved hypothetical protein.
  
     0.728
ABM79167.1
Conserved hypothetical protein.
  
     0.721
ABM79424.1
Conserved hypothetical protein.
  
     0.706
ABM78486.1
Conserved hypothetical protein.
  
     0.700
ABM77737.1
Conserved hypothetical protein.
  
     0.699
ABM78609.1
Conserved hypothetical protein.
  
     0.694
ABM78512.1
Bacterial regulatory proteins, Crp family protein; COG664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].
  
     0.691
ABM79124.1
Conserved hypothetical protein.
  
     0.690
ABM77275.1
Conserved hypothetical protein.
  
     0.683
Your Current Organism:
Prochlorococcus marinus MIT9303
NCBI taxonomy Id: 59922
Other names: P. marinus str. MIT 9303, Prochlorococcus marinus str. MIT 9303, Prochlorococcus sp. MIT 9303, Prochlorococcus sp. MIT9303
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.