STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU91_0010ABC transporter; Alternative locus ID: PGP2_1854; substrate binding protein for amino acids precursor. (366 aa)    
Predicted Functional Partners:
EU91_0012
ABC-type amino acid transport system permease component; Alternative locus ID: PGP2_1856.
 
 0.998
EU91_0011
ABC transporter for amino acid; Alternative locus ID: PGP2_1855; membrane component.
 
 
 0.997
EU91_0013
ABC transporter for amino acid; Alternative locus ID: PGP2_1857; ATP binding component.
 
 0.996
EU91_0859
Putative urea ABC transporter; Alternative locus ID: PGP2_1165; substrate binding protein.
   
 
 0.697
pheA
Prephenate dehydratase; Alternative locus ID: PGP2_0272.
     
 0.631
EU91_0622
ABC-type multidrug transport system; Alternative locus ID: PGP2_0944; ATPase component.
    
 0.607
EU91_1679
Ferredoxin-dependent glutamate synthase; Alternative locus ID: PGP2_0280.
  
  
 0.599
EU91_1731
Arogenate dehydrogenase; Alternative locus ID: PGP2_0332.
    
 0.598
EU91_1477
Putative radical SAM family enzyme in heat shock protein cluster; Alternative locus ID: PGP2_0078; similarity with CPO of BS HemN-type.
     
 0.572
EU91_0856
Urea ABC transporter; Alternative locus ID: PGP2_1162; permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
     
 0.552
Your Current Organism:
Prochlorococcus marinus GP2
NCBI taxonomy Id: 59925
Other names: P. marinus str. GP2, Prochlorococcus marinus str. GP2, Prochlorococcus marinus str. RCC296, Prochlorococcus sp. GP2, Prochlorococcus sp. RCC296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.