STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU91_0026Acetylornithine aminotransferase; Alternative locus ID: PGP2_1375. (346 aa)    
Predicted Functional Partners:
EU91_0025
Aldehyde decarbonylase; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
 
 
 
 0.992
accA
Acetyl-coenzyme A carboxyl transferase alpha chain; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
     
 0.846
EU91_0028
Sepiapterin reductase; Alternative locus ID: PGP2_1377; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.824
EU91_0231
Putative high light inducible protein; Alternative locus ID: PGP2_0553.
  
     0.751
EU91_1736
Cob(I)alamin adenosyltransferase; Alternative locus ID: PGP2_0337.
  
     0.739
EU91_0685
Ribonucleotide reductase of class II (coenzyme B12-dependent); Alternative locus ID: PGP2_0991.
  
     0.731
EU91_0605
Hypothetical protein; Alternative locus ID: PGP2_0927; FIG00940877: hypothetical protein.
  
     0.725
EU91_0288
Hypothetical protein; Alternative locus ID: PGP2_0610.
  
     0.686
EU91_1594
Hypothetical protein; Alternative locus ID: PGP2_0195; FIG00940582: hypothetical protein.
  
     0.683
EU91_0144
Hypothetical protein; Alternative locus ID: PGP2_1493; FIG00942612: hypothetical protein.
  
     0.639
Your Current Organism:
Prochlorococcus marinus GP2
NCBI taxonomy Id: 59925
Other names: P. marinus str. GP2, Prochlorococcus marinus str. GP2, Prochlorococcus marinus str. RCC296, Prochlorococcus sp. GP2, Prochlorococcus sp. RCC296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.