STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU91_0232ATP-binding protein of ABC transporter; Alternative locus ID: PGP2_0554. (660 aa)    
Predicted Functional Partners:
EU91_0231
Putative high light inducible protein; Alternative locus ID: PGP2_0553.
       0.824
EU91_1273
ATPase of the AAA+ family; Alternative locus ID: PGP2_1560.
     
 0.775
EU91_0503
Aldehyde dehydrogenase; Alternative locus ID: PGP2_0825; Belongs to the aldehyde dehydrogenase family.
     
 0.765
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
   0.749
EU91_0916
Small GTP-binding protein domain; Alternative locus ID: PGP2_1222.
    
 0.664
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.644
EU91_0233
Hypothetical protein; Alternative locus ID: PGP2_0555; FIG00941168: hypothetical protein.
       0.639
EU91_0234
Bis(5'-nucleosyl)-tetraphosphatasee (asymmetrical); Alternative locus ID: PGP2_0556.
       0.564
EU91_1913
Band 7 protein; Alternative locus ID: PGP2_1883.
    
  0.531
EU91_0449
Retinal pigment epithelial membrane protein; Alternative locus ID: PGP2_0771.
  
  
  0.527
Your Current Organism:
Prochlorococcus marinus GP2
NCBI taxonomy Id: 59925
Other names: P. marinus str. GP2, Prochlorococcus marinus str. GP2, Prochlorococcus marinus str. RCC296, Prochlorococcus sp. GP2, Prochlorococcus sp. RCC296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.