STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU91_0938Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (145 aa)    
Predicted Functional Partners:
EU91_1459
Peptidylprolyl isomerase; Alternative locus ID: PGP2_0060.
 
  
 0.947
EU91_1087
Cold-shock DEAD-box protein A; Alternative locus ID: PGP2_1703; Belongs to the DEAD box helicase family.
  
 0.904
EU91_0931
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.899
EU91_0936
DnaJ-class molecular chaperone CbpA; Alternative locus ID: PGP2_1242.
   
   0.853
EU91_0344
O-succinylbenzoic acid--CoA ligase; Alternative locus ID: PGP2_0666.
   
 
 0.829
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.818
EU91_0937
Hypothetical protein; Alternative locus ID: PGP2_1243; FIG00940620: hypothetical protein.
   
  0.814
rpsQ
SSU ribosomal protein S17p (S11e); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.811
rplU
LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
   0.804
rplQ
LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.
    
   0.804
Your Current Organism:
Prochlorococcus marinus GP2
NCBI taxonomy Id: 59925
Other names: P. marinus str. GP2, Prochlorococcus marinus str. GP2, Prochlorococcus marinus str. RCC296, Prochlorococcus sp. GP2, Prochlorococcus sp. RCC296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.