STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU91_0993Putative Uncharacterized secreted protein; Alternative locus ID: PGP2_1299; Ya. (146 aa)    
Predicted Functional Partners:
EU91_0994
Type II secretory pathway; Alternative locus ID: PGP2_1300; pseudopilin PulG.
       0.696
EU91_0992
3'-to-5' exoribonuclease RNase R; Alternative locus ID: PGP2_1298; Belongs to the RNR ribonuclease family.
       0.686
acsF
Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic); Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
       0.547
EU91_0996
TldD protein; Alternative locus ID: PGP2_1302; part of proposed TldE/TldD proteolytic complex.
       0.507
EU91_0997
TldE/PmbA protein; Alternative locus ID: PGP2_1303; part of proposed TldE/TldD proteolytic complex.
       0.507
EU91_0990
Hypothetical protein; Alternative locus ID: PGP2_1296; FIG00940821: hypothetical protein.
       0.503
EU91_0991
Hypothetical protein; Alternative locus ID: PGP2_1297; FIG00941530: hypothetical protein.
       0.501
EU91_0989
Hypothetical protein; Alternative locus ID: PGP2_1295.
       0.489
Your Current Organism:
Prochlorococcus marinus GP2
NCBI taxonomy Id: 59925
Other names: P. marinus str. GP2, Prochlorococcus marinus str. GP2, Prochlorococcus marinus str. RCC296, Prochlorococcus sp. GP2, Prochlorococcus sp. RCC296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.