Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EU91_1624 | EU91_1682 | EU91_1624 | EU91_1682 | Cytochrome c-type bioproteinsis protein CcdA (DsbD-like); Alternative locus ID: PGP2_0225. | Site-specific recombinase; Alternative locus ID: PGP2_0283. | 0.414 |
EU91_1682 | EU91_1624 | EU91_1682 | EU91_1624 | Site-specific recombinase; Alternative locus ID: PGP2_0283. | Cytochrome c-type bioproteinsis protein CcdA (DsbD-like); Alternative locus ID: PGP2_0225. | 0.414 |
EU91_1682 | EU91_1683 | EU91_1682 | EU91_1683 | Site-specific recombinase; Alternative locus ID: PGP2_0283. | Hypothetical protein; Alternative locus ID: PGP2_0284; FIG00942362: hypothetical protein. | 0.824 |
EU91_1682 | EU91_1867 | EU91_1682 | EU91_1867 | Site-specific recombinase; Alternative locus ID: PGP2_0283. | Chloride channel protein; Alternative locus ID: PGP2_0469. | 0.455 |
EU91_1682 | lipA-2 | EU91_1682 | EU91_1681 | Site-specific recombinase; Alternative locus ID: PGP2_0283. | Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.481 |
EU91_1682 | topA | EU91_1682 | EU91_0609 | Site-specific recombinase; Alternative locus ID: PGP2_0283. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.420 |
EU91_1683 | EU91_1682 | EU91_1683 | EU91_1682 | Hypothetical protein; Alternative locus ID: PGP2_0284; FIG00942362: hypothetical protein. | Site-specific recombinase; Alternative locus ID: PGP2_0283. | 0.824 |
EU91_1683 | lipA-2 | EU91_1683 | EU91_1681 | Hypothetical protein; Alternative locus ID: PGP2_0284; FIG00942362: hypothetical protein. | Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.481 |
EU91_1867 | EU91_1682 | EU91_1867 | EU91_1682 | Chloride channel protein; Alternative locus ID: PGP2_0469. | Site-specific recombinase; Alternative locus ID: PGP2_0283. | 0.455 |
lipA-2 | EU91_1682 | EU91_1681 | EU91_1682 | Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Site-specific recombinase; Alternative locus ID: PGP2_0283. | 0.481 |
lipA-2 | EU91_1683 | EU91_1681 | EU91_1683 | Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Hypothetical protein; Alternative locus ID: PGP2_0284; FIG00942362: hypothetical protein. | 0.481 |
topA | EU91_1682 | EU91_0609 | EU91_1682 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Site-specific recombinase; Alternative locus ID: PGP2_0283. | 0.420 |