STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17554.1Hypothetical protein; COG1882 Pyruvate-formate lyase. (161 aa)    
Predicted Functional Partners:
EAR18222.1
Hypothetical protein.
  
     0.769
EAR19172.1
Hypothetical protein.
  
     0.746
EAR17766.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
     0.744
EAR18802.1
Hypothetical protein.
  
     0.742
EAR17953.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
     0.712
rpmH
Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.
  
     0.686
EAR18540.1
Bacterial regulatory proteins, Crp family protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.682
EAR19490.1
Hypothetical protein.
  
     0.678
EAR17507.1
Hypothetical protein.
  
     0.665
EAR17924.1
Hypothetical protein; COG0531 Amino acid transporters.
  
     0.664
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.