STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18466.1ABC transporter, substrate binding protein, possibly Mn; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family. (297 aa)    
Predicted Functional Partners:
EAR18465.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 
 0.976
EAR18464.1
COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 
 0.972
EAR18452.1
ABC transporter, ATP binding domain, possibly Mn transporter; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 
 0.954
EAR18456.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 
 0.953
EAR18462.1
COG3689 Predicted membrane protein.
       0.547
EAR18463.1
Hypothetical protein.
       0.525
EAR18461.1
COG0701 Predicted permeases.
       0.523
EAR18460.1
COG2010 Cytochrome c, mono- and diheme variants.
       0.476
rpmB
COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.460
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.459
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.