STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18467.1Possible porin; Belongs to the OprB family. (537 aa)    
Predicted Functional Partners:
EAR19200.1
COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain.
  
     0.772
EAR19202.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.764
EAR19961.1
Hypothetical protein.
  
     0.744
EAR19812.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
   
 0.734
EAR18656.1
COG0795 Predicted permeases.
  
     0.715
EAR17347.1
Possible general (type II) secretion pathway protein D precursor; COG4796 Type II secretory pathway, component HofQ; Belongs to the bacterial secretin family.
  
     0.705
EAR18463.1
Hypothetical protein.
  
     0.700
EAR18264.1
COG1589 Cell division septal protein.
  
     0.692
EAR19211.1
Hypothetical protein.
  
     0.690
EAR18697.1
Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase).
  
     0.688
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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