STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18571.1COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family. (129 aa)    
Predicted Functional Partners:
EAR18615.1
Hypothetical protein; COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.999
EAR19273.1
Possible ABC transporter, ATP-binding component; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
   
  0.999
EAR17730.1
Hypothetical protein; COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.988
EAR18675.1
Hypothetical protein.
  
    0.978
EAR19272.1
Possible ABC transporter; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
  0.978
EAR19833.1
Possible transporter, membrane component; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
   
  0.978
mrnC
Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
       0.800
EAR18566.1
Putative regulator.
 
     0.785
EAR19035.1
PBS lyase HEAT-like repeat protein; COG1413 FOG: HEAT repeat.
  
     0.772
EAR19740.1
Allophycocyanin alpha chain; COG0840 Methyl-accepting chemotaxis protein.
  
     0.758
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.