STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18627.1COG0076 Glutamate decarboxylase and related PLP-dependent proteins. (481 aa)    
Predicted Functional Partners:
EAR19133.1
Ferredoxin-dependent glutamate synthase, Fd-GOGAT; COG0067 Glutamate synthase domain 1.
     
 0.950
panC/cmk
Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
 
 0.923
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.889
EAR19796.1
Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
   
 
 0.884
EAR18626.1
Hypothetical protein.
       0.773
EAR17639.1
Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase.
    
 0.714
EAR18197.1
Putative oxidoreductase; COG1231 Monoamine oxidase.
  
 
 0.693
hisI
Histidine biosynthesis bifunctional protein HisIE; COG0139 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
    
 0.683
EAR18967.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
   
 0.676
EAR18625.1
Putative cytidine/deoxycytidylate deaminase; COG0590 Cytosine/adenosine deaminases.
       0.621
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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