STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18640.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
EAR18637.1
Possible ABC transporter component; COG0845 Membrane-fusion protein.
       0.695
EAR18638.1
DevC protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
       0.695
EAR18639.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
       0.695
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
       0.669
EAR18641.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.596
EAR18635.1
COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
       0.505
EAR18634.1
Insulinase family (Peptidase family M16); COG0612 Predicted Zn-dependent peptidases.
       0.494
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
       0.416
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.