STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18679.1COG4360 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II). (298 aa)    
Predicted Functional Partners:
EAR19164.1
ATP-sulfurylase; COG2046 ATP sulfurylase (sulfate adenylyltransferase).
  
  
  0.894
EAR18680.1
COG2385 Sporulation protein and related proteins.
       0.801
EAR18678.1
Possible type 3 alternative RNA polymerase sigma factor; COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.
       0.605
EAR17924.1
Hypothetical protein; COG0531 Amino acid transporters.
  
     0.603
EAR18108.1
COG3239 Fatty acid desaturase.
  
     0.596
EAR18857.1
Hypothetical protein; COG4240 Predicted kinase.
  
     0.571
EAR18681.1
Possible CsgA C-factor signaling protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.567
EAR18228.1
COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
  
     0.560
EAR19454.1
Hypothetical protein.
  
     0.544
EAR19518.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.540
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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