STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18721.1COG0633 Ferredoxin. (122 aa)    
Predicted Functional Partners:
EAR18724.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.928
EAR18038.1
ferredoxin--NADP reductase (FNR); COG0369 Sulfite reductase, alpha subunit (flavoprotein).
  
 
 
 0.884
EAR19055.1
Photosystem I reaction center subunit II (PsaD).
  
 
 
 0.883
EAR19976.1
Photosystem I reaction center subunit III (PsaF); COG1217 Predicted membrane GTPase involved in stress response.
  
 
 0.880
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
 
 
 0.860
EAR19753.1
COG0633 Ferredoxin.
  
  
 
0.860
EAR17362.1
BioI; COG2124 Cytochrome P450.
  
 0.859
EAR19790.1
COG0633 Ferredoxin.
  
  
 
0.858
EAR19571.1
Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
 
 
 0.843
EAR18481.1
COG2124 Cytochrome P450.
   
 0.841
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.