STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18792.1Hypothetical protein; COG1407 Predicted ICC-like phosphoesterases. (240 aa)    
Predicted Functional Partners:
EAR18769.1
Putative ATP-dependent helicase; COG1201 Lhr-like helicases.
 
    0.816
EAR18768.1
DNA ligase; COG1793 ATP-dependent DNA ligase.
 
   
 0.809
EAR18766.1
Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
 
     0.800
EAR18791.1
Hypothetical protein.
       0.561
EAR18793.1
Hypothetical protein.
       0.503
EAR18789.1
Possible ligand gated channel (GIC family) protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.412
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.