STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18123.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (259 aa)    
Predicted Functional Partners:
EAR18910.1
Possible L-asparaginase II; COG0535 Predicted Fe-S oxidoreductases.
     0.923
EAR18124.1
Hypothetical protein.
       0.773
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.695
EAR20117.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.685
EAR20118.1
COG3222 Uncharacterized protein conserved in bacteria.
  
     0.664
EAR18125.1
Putative chaperon-like protein for quinone binding in photosystem II; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
    
  0.647
EAR18481.1
COG2124 Cytochrome P450.
    
 0.531
EAR17362.1
BioI; COG2124 Cytochrome P450.
    
 0.531
EAR17874.1
Hypothetical protein.
  
  
  0.512
EAR18685.1
Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.486
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.