STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR18382.1COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters. (305 aa)    
Predicted Functional Partners:
EAR18632.1
Hypothetical protein.
  
 0.997
EAR17975.1
ATPase; COG1122 ABC-type cobalt transport system, ATPase component.
 
 0.997
EAR19474.1
Possible ABC transporter, ATP-binding component; COG1122 ABC-type cobalt transport system, ATPase component.
 
 0.997
EAR17370.1
ABC transporter, ATP binding component, possibly for oligopeptides; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
 0.980
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.884
EAR18381.1
Hypothetical protein.
 
   
 0.870
EAR19125.1
cbiH protein and precorrin-3B C17-methyltransferase; COG2073 Cobalamin biosynthesis protein CbiG.
  
  
 0.793
EAR19939.1
Hypothetical protein.
  
     0.767
EAR19598.1
Hypothetical protein.
  
     0.760
EAR17684.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.759
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.