STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pebBPhycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family. (257 aa)    
Predicted Functional Partners:
cpcS-3
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.948
pebA
15,16 dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
 
  
 
0.915
EAR19013.1
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.854
EAR19027.1
C-phycoerythrin class I beta chain.
 
   
 0.840
EAR19026.1
C-phycoerythrin class I alpha chain.
 
   
 0.831
EAR19025.1
Putative bilin biosynthesis protein cpeZ; COG1413 FOG: HEAT repeat.
 
   
 0.814
EAR19015.1
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.796
cpcS-2
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.782
EAR19021.1
Putative bilin biosynthesis protein CpeY; COG1413 FOG: HEAT repeat.
  
   
 0.777
EAR19024.1
Hypothetical protein; COG1413 FOG: HEAT repeat.
  
   
 0.777
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.