STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19211.1Hypothetical protein. (1033 aa)    
Predicted Functional Partners:
EAR17969.1
Putative type III sigma factor; COG1191 DNA-directed RNA polymerase specialized sigma subunit.
 
 
 0.834
EAR18678.1
Possible type 3 alternative RNA polymerase sigma factor; COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.
  
 
 0.793
EAR17490.1
Hypothetical protein.
  
     0.774
EAR18784.1
Possible porin; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Belongs to the OprB family.
  
     0.774
EAR18144.1
Hypothetical protein.
  
     0.772
EAR18844.1
Hypothetical protein; COG1933 Archaeal DNA polymerase II, large subunit.
  
     0.771
EAR17766.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
     0.771
EAR19961.1
Hypothetical protein.
  
     0.771
EAR18020.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.769
EAR19397.1
Hypothetical protein; COG1413 FOG: HEAT repeat.
  
     0.767
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.