STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19296.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
EAR19294.1
Putative polysialic acid capsule expression protein KpsF; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.
 
     0.812
EAR19295.1
Phosphatase kdsC; COG1778 Low specificity phosphatase (HAD superfamily).
       0.773
EAR19424.1
Hypothetical protein.
  
     0.707
EAR19366.1
Truncated O-antigen biosynthesis protein; COG0457 FOG: TPR repeat.
  
 0.670
EAR19292.1
UvrD/REP helicase; COG0210 Superfamily I DNA and RNA helicases.
       0.564
EAR19293.1
Hypothetical protein.
       0.564
EAR17622.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.532
EAR19982.1
COG4333 Uncharacterized protein conserved in bacteria.
  
     0.499
EAR19127.1
COG1216 Predicted glycosyltransferases.
  
 
 0.427
EAR19289.1
Hypothetical protein; COG1216 Predicted glycosyltransferases.
  
 
 0.427
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.