STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EAR19311.1Putative glycosyl transferase, group 1; COG0438 Glycosyltransferase. (382 aa)    
Predicted Functional Partners:
EAR19309.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
 
  0.897
EAR19310.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
    
0.838
EAR19305.1
Hypothetical protein.
 
     0.813
EAR19312.1
Glycosyltransferase-like protein; COG0438 Glycosyltransferase.
       0.773
EAR19313.1
Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.773
EAR18966.1
Alpha amylase, catalytic subdomain; COG0366 Glycosidases.
    
 0.592
EAR19388.1
GDP-mannose pyrophosphorylase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.580
EAR19315.1
COG5398 Heme oxygenase.
   
   0.562
EAR19314.1
Hypothetical protein; COG0438 Glycosyltransferase.
       0.554
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.541
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.