STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19317.1COG3394 Uncharacterized protein conserved in bacteria. (434 aa)    
Predicted Functional Partners:
EAR19316.1
Hypothetical protein.
       0.554
EAR19315.1
COG5398 Heme oxygenase.
 
     0.542
EAR18338.1
Urea transporter, putative; COG4413 Urea transporter.
  
     0.479
EAR19659.1
Aspartoacylase; COG2988 Succinylglutamate desuccinylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.423
EAR19309.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
    0.422
EAR19314.1
Hypothetical protein; COG0438 Glycosyltransferase.
       0.401
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.