STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17773.1Hypothetical protein; COG0170 Dolichol kinase. (214 aa)    
Predicted Functional Partners:
EAR17774.1
Type II alternative RNA polymerase sigma factor, sigma-70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.812
EAR19710.1
Hypothetical protein.
  
     0.722
EAR17639.1
Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase.
   
 0.577
EAR18803.1
Hypothetical protein.
  
 
   0.576
EAR18892.1
Hypothetical protein.
  
     0.549
EAR20004.1
Hypothetical protein.
  
     0.539
EAR19151.1
Elongator protein 3/MiaB/NifB; COG1032 Fe-S oxidoreductase.
  
     0.534
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.492
EAR19562.1
Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
  
  
  0.490
EAR19166.1
Hypothetical protein.
  
     0.485
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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