STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17830.1Alpha amylase, catalytic subdomain; COG0366 Glycosidases. (576 aa)    
Predicted Functional Partners:
EAR17829.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
   
 0.967
EAR17831.1
HAD-superfamily hydrolase YedP; COG3769 Predicted hydrolase (HAD superfamily).
 
     0.951
EAR18966.1
Alpha amylase, catalytic subdomain; COG0366 Glycosidases.
 
0.924
EAR18367.1
Hypothetical protein; COG0531 Amino acid transporters.
    
 0.913
EAR17832.1
Amino acid permease family protein; COG0531 Amino acid transporters.
    
 0.913
EAR17748.1
Sucrose phosphate synthase; COG0438 Glycosyltransferase.
   
 0.767
EAR19366.1
Truncated O-antigen biosynthesis protein; COG0457 FOG: TPR repeat.
     
 0.702
EAR19835.1
Alpha amylase, catalytic subdomain; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.644
EAR19330.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.623
EAR18026.1
COG1640 4-alpha-glucanotransferase.
  
 
 0.585
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.