Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR17556.1 | EAR17844.1 | WH7805_00540 | WH7805_09949 | Hypothetical protein; COG0625 Glutathione S-transferase. | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.668 |
| EAR17556.1 | rpoA | WH7805_00540 | WH7805_07096 | Hypothetical protein; COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.919 |
| EAR17556.1 | rpoB | WH7805_00540 | WH7805_12313 | Hypothetical protein; COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.840 |
| EAR17556.1 | rpoC1 | WH7805_00540 | WH7805_12318 | Hypothetical protein; COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase gamma chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.818 |
| EAR17556.1 | rpoC2 | WH7805_00540 | WH7805_12323 | Hypothetical protein; COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily. | 0.818 |
| EAR17556.1 | rpoZ | WH7805_00540 | WH7805_12703 | Hypothetical protein; COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.852 |
| EAR17843.1 | EAR17844.1 | WH7805_09944 | WH7805_09949 | DpsA; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family. | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.699 |
| EAR17844.1 | EAR17556.1 | WH7805_09949 | WH7805_00540 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; COG0625 Glutathione S-transferase. | 0.668 |
| EAR17844.1 | EAR17843.1 | WH7805_09949 | WH7805_09944 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DpsA; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family. | 0.699 |
| EAR17844.1 | EAR18006.1 | WH7805_09949 | WH7805_04421 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG0625 Glutathione S-transferase. | 0.668 |
| EAR17844.1 | EAR20042.1 | WH7805_09949 | WH7805_14018 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family. | 0.786 |
| EAR17844.1 | dnaG | WH7805_09949 | WH7805_02067 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.769 |
| EAR17844.1 | rpoA | WH7805_09949 | WH7805_07096 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.809 |
| EAR17844.1 | rpoB | WH7805_09949 | WH7805_12313 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.846 |
| EAR17844.1 | rpoC1 | WH7805_09949 | WH7805_12318 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase gamma chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.800 |
| EAR17844.1 | rpoC2 | WH7805_09949 | WH7805_12323 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily. | 0.800 |
| EAR17844.1 | rpoZ | WH7805_09949 | WH7805_12703 | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.809 |
| EAR18006.1 | EAR17844.1 | WH7805_04421 | WH7805_09949 | COG0625 Glutathione S-transferase. | Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.668 |
| EAR18006.1 | rpoA | WH7805_04421 | WH7805_07096 | COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.919 |
| EAR18006.1 | rpoB | WH7805_04421 | WH7805_12313 | COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.840 |
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