STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17868.1ATPase; COG4586 ABC-type uncharacterized transport system, ATPase component. (326 aa)    
Predicted Functional Partners:
EAR17869.1
Putative multidrug efflux ABC transporter; COG4587 ABC-type uncharacterized transport system, permease component.
 
  
 0.967
EAR17870.1
Conserved membrane protein, multidrug efflux associated; COG3694 ABC-type uncharacterized transport system, permease component.
 
  
 0.963
EAR19156.1
ABC transporter, ATP binding component, glycine betaine/proline family protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
     
0.527
EAR17866.1
COG3264 Small-conductance mechanosensitive channel.
       0.505
EAR17867.1
ABC-type sugar transport system periplasmic component-like protein; COG2182 Maltose-binding periplasmic proteins/domains.
       0.505
EAR18734.1
ABC transporter for sugars, ATP binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
    
0.453
EAR17827.1
Putative ATP-binding subunit of urea ABC transport system; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
     
0.432
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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