STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19494.1Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (488 aa)    
Predicted Functional Partners:
EAR18894.1
Carotenoid isomerase; COG1233 Phytoene dehydrogenase and related proteins.
  
  
 0.981
EAR18072.1
Lycopene beta cyclase; COG0644 Dehydrogenases (flavoproteins).
  
  
 0.921
EAR19457.1
COG1562 Phytoene/squalene synthetase.
 
  
 0.904
EAR19456.1
Phytoene desaturase.
  
  
0.897
EAR19495.1
Hypothetical protein; COG5637 Predicted integral membrane protein.
 
     0.859
EAR19452.1
COG4094 Predicted membrane protein.
  
     0.771
EAR19165.1
Photosystem II manganese-stabilizing polypeptide.
  
     0.767
EAR18556.1
COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
  
     0.758
EAR18614.1
Hypothetical protein; COG0563 Adenylate kinase and related kinases.
  
     0.753
EAR18736.1
Hypothetical protein.
  
     0.752
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.