EAR19538.1 protein (Synechococcus sp. WH 7805)

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Score

EAR19538.1

ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (574 aa)

Predicted Functional Partners:

rplD

0.929

rpsI

0.929

rplU

0.926

rpsO

0.925

rplC

0.924

rpsC

0.924

rpmH

0.924

rplR

0.923

rplM

0.923

rplT

0.923

Your Current Organism:

Synechococcus sp. WH 7805

NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAR19538.1	rplC	WH7805_11498	WH7805_06976	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.924
EAR19538.1	rplD	WH7805_11498	WH7805_06981	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.929
EAR19538.1	rplM	WH7805_11498	WH7805_07111	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.923
EAR19538.1	rplR	WH7805_11498	WH7805_07051	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.923
EAR19538.1	rplT	WH7805_11498	WH7805_09144	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.923
EAR19538.1	rplU	WH7805_11498	WH7805_12828	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.926
EAR19538.1	rpmH	WH7805_11498	WH7805_13413	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.924
EAR19538.1	rpsC	WH7805_11498	WH7805_07006	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.924
EAR19538.1	rpsI	WH7805_11498	WH7805_07116	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.929
EAR19538.1	rpsO	WH7805_11498	WH7805_02047	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.925
rplC	EAR19538.1	WH7805_06976	WH7805_11498	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ATPase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	0.924
rplC	rplD	WH7805_06976	WH7805_06981	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplM	WH7805_06976	WH7805_07111	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplR	WH7805_06976	WH7805_07051	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplC	rplT	WH7805_06976	WH7805_09144	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplC	rplU	WH7805_06976	WH7805_12828	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplC	rpmH	WH7805_06976	WH7805_13413	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.999
rplC	rpsC	WH7805_06976	WH7805_07006	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsI	WH7805_06976	WH7805_07116	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplC	rpsO	WH7805_06976	WH7805_02047	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999