STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19586.1Mg chelatase-related protein; COG0606 Predicted ATPase with chaperone activity. (525 aa)    
Predicted Functional Partners:
EAR18991.1
SMF family protein; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
 0.831
EAR18298.1
COG0658 Predicted membrane metal-binding protein.
 
  
 0.669
EAR19587.1
HIT (histidine triad) family protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
       0.582
ruvC
Holliday junction resolvase RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.520
EAR19588.1
ABC transporter, ATP binding protein; COG4178 ABC-type uncharacterized transport system, permease and ATPase components.
       0.461
EAR19589.1
Possible high light inducible protein.
       0.458
EAR19005.1
Hypothetical protein; COG1040 Predicted amidophosphoribosyltransferases.
  
  
 0.410
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.