STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19690.1Possible ABC transporter, solute binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (284 aa)    
Predicted Functional Partners:
EAR17279.1
Alkaline phosphatase.
 
 0.744
EAR17278.1
Alkaline phosphatase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
 
 0.696
EAR19685.1
Putative arylsulfatase regulatory protein; COG0641 Arylsulfatase regulator (Fe-S oxidoreductase).
  
     0.679
EAR18192.1
COG2149 Predicted membrane protein.
  
     0.640
EAR19689.1
Hypothetical protein.
       0.625
EAR19823.1
COG1555 DNA uptake protein and related DNA-binding proteins.
  
     0.621
EAR19691.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
   
  0.597
EAR18205.1
Sensory box/GGDEF domain protein; COG2202 FOG: PAS/PAC domain.
     
 0.596
EAR18191.1
COG4828 Predicted membrane protein.
  
     0.593
EAR18185.1
Hypothetical protein.
  
     0.578
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.