STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19710.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
EAR19711.1
COG1141 Ferredoxin.
 
     0.892
EAR19709.1
Hypothetical protein.
 
     0.808
EAR18892.1
Hypothetical protein.
  
     0.752
EAR18803.1
Hypothetical protein.
  
     0.736
EAR19712.1
Hypothetical protein; COG1453 Predicted oxidoreductases of the aldo/keto reductase family.
 
     0.735
EAR17773.1
Hypothetical protein; COG0170 Dolichol kinase.
  
     0.722
EAR20004.1
Hypothetical protein.
  
     0.719
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.708
EAR19831.1
COG3074 Uncharacterized protein conserved in bacteria.
  
     0.706
EAR19708.1
Hypothetical protein; COG1413 FOG: HEAT repeat.
 
     0.700
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.