STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19735.1COG0785 Cytochrome c biogenesis protein. (156 aa)    
Predicted Functional Partners:
ccsB
Putative c-type cytochrome biogenesis protein Ccs1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.914
EAR17684.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.683
ccsA
Possible heme transporter; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
  
 0.657
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.593
EAR19919.1
Hypothetical protein.
  
     0.588
EAR19736.1
Hypothetical protein.
       0.559
EAR18847.1
Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type.
  
 
   0.555
EAR17974.1
Hypothetical protein; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.
  
     0.555
EAR18845.1
Hypothetical protein.
  
     0.553
EAR18117.1
COG0492 Thioredoxin reductase.
  
  
 0.519
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.