STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19738.1Linker polypeptide, allophycocyanin-associated protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (66 aa)    
Predicted Functional Partners:
EAR18623.1
Phycobilisome core component-allophycocyanin beta-18 subunit.
 
 
 0.999
EAR18673.1
Allophycocyanin alpha-B chain.
 
 
 0.999
EAR19739.1
Allophycocyanin, beta subunit.
 
 
 0.999
EAR19740.1
Allophycocyanin alpha chain; COG0840 Methyl-accepting chemotaxis protein.
 
 
 0.999
EAR19742.1
Anchor polypeptide LCM; Belongs to the phycobilisome linker protein family.
  
 
 0.999
EAR19566.1
Phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5); COG0451 Nucleoside-diphosphate-sugar epimerases; Belongs to the phycobilisome linker protein family.
  
 
 
 0.990
EAR19033.1
Phycocyanin, beta subunit.
  
 
 
 0.987
EAR19034.1
Phycocyanin, alpha subunit.
  
 
 
 0.986
EAR19027.1
C-phycoerythrin class I beta chain.
  
 
 
 0.970
EAR19026.1
C-phycoerythrin class I alpha chain.
  
 
 
 0.968
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.