STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19801.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (252 aa)    
Predicted Functional Partners:
EAR19271.1
Magnesium chelatase ATPase subunit D; COG1239 Mg-chelatase subunit ChlI.
  
 0.944
EAR17987.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
   
   0.820
EAR19802.1
Hypothetical protein.
       0.768
truB
Putative tRNA pseudouridine 55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.614
EAR17554.1
Hypothetical protein; COG1882 Pyruvate-formate lyase.
  
     0.549
EAR17494.1
Lipase family protein; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
  
     0.535
EAR18685.1
Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.484
EAR18938.1
Possible oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
  
 
   0.469
EAR19798.1
Hypothetical protein.
     
 0.468
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
  0.452
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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