STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19913.1Hypothetical protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1. (361 aa)    
Predicted Functional Partners:
EAR19812.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
  
 0.820
EAR18009.1
Undecaprenyl pyrophosphate synthetase (UPPS); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.777
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.755
EAR19133.1
Ferredoxin-dependent glutamate synthase, Fd-GOGAT; COG0067 Glutamate synthase domain 1.
  
  
 0.704
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
       0.679
EAR18017.1
Hypothetical protein; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.
  
    0.640
EAR20044.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.633
EAR19915.1
Hypothetical protein.
       0.560
EAR18982.1
Hypothetical protein; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
  
 0.556
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
  
 0.550
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.