STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19916.1Hypothetical protein; COG0464 ATPases of the AAA+ class. (499 aa)    
Predicted Functional Partners:
EAR19888.1
COG1518 Uncharacterized protein predicted to be involved in DNA repair.
   
 0.887
EAR18236.1
Putative histone deacetylase/AcuC/AphA family protein; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
    
 0.878
EAR17741.1
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 0.853
EAR19918.1
Putative inner membrane protein translocase component YidC; COG0706 Preprotein translocase subunit YidC.
     
 0.824
EAR19776.1
Hypothetical protein.
    
 0.816
EAR19917.1
Hypothetical protein.
       0.816
EAR18629.1
Hypothetical protein; COG0486 Predicted GTPase.
    
 0.793
EAR19588.1
ABC transporter, ATP binding protein; COG4178 ABC-type uncharacterized transport system, permease and ATPase components.
     
 0.793
EAR19472.1
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
    
  0.786
EAR18725.1
Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family.
    
 0.779
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
Server load: high (92%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.