STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR19979.1Twitching motility protein; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT. (344 aa)    
Predicted Functional Partners:
EAR17724.1
Pili biogenesis protein; COG1459 Type II secretory pathway, component PulF.
 
  
 0.908
EAR18814.1
COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
   
 0.806
EAR19980.1
Hypothetical protein.
       0.549
EAR19981.1
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.472
EAR19982.1
COG4333 Uncharacterized protein conserved in bacteria.
       0.472
EAR19983.1
Hypothetical protein.
       0.472
EAR19984.1
Putative Na+/H+ antiporter, CPA1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
       0.472
EAR18298.1
COG0658 Predicted membrane metal-binding protein.
     
 0.416
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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