STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20006.1Hypothetical protein; Belongs to the LarC family. (406 aa)    
Predicted Functional Partners:
EAR19062.1
Hypothetical protein; COG1606 ATP-utilizing enzymes of the PP-loop superfamily.
  
 0.910
EAR18221.1
Putative circadian phase modifier CpmA; COG1691 NCAIR mutase (PurE)-related proteins.
 
  
 0.900
EAR20004.1
Hypothetical protein.
       0.800
EAR20007.1
Hypothetical protein; COG0392 Predicted integral membrane protein.
       0.800
EAR20005.1
Hypothetical protein.
       0.774
EAR20003.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.552
EAR19942.1
Hypothetical protein; COG1453 Predicted oxidoreductases of the aldo/keto reductase family.
 
    0.551
EAR19712.1
Hypothetical protein; COG1453 Predicted oxidoreductases of the aldo/keto reductase family.
 
    0.530
EAR20009.1
Hypothetical protein; COG3211 Predicted phosphatase.
       0.519
EAR20010.1
Hypothetical protein; COG3211 Predicted phosphatase.
       0.519
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.